Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpn1Q8CCS6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Gm8968-201ENSMUST00000199133 1303 ntBASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Gm43106-201ENSMUST00000199485 637 ntBASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpn1Q8CCS6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Gm15610-201ENSMUST00000120584 195 ntBASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Gm5706-201ENSMUST00000181525 993 ntBASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpn1Q8CCS6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pabpn1Q8CCS6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pabpn1Q8CCS6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pabpn1Q8CCS6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pabpn1Q8CCS6 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC18.52■□□□□ 0.55
Pabpn1Q8CCS6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm45199-201ENSMUST00000207640 1507 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm16209-201ENSMUST00000118457 627 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm10171-201ENSMUST00000126220 628 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm26047-201ENSMUST00000157308 113 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm26047-202ENSMUST00000198840 115 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 AC134248.1-201ENSMUST00000216113 1176 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Krtap6-3-201ENSMUST00000079151 444 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm10233-201ENSMUST00000089275 628 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Gm43167-201ENSMUST00000202001 1606 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpn1Q8CCS6 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC18.5■□□□□ 0.55
Pabpn1Q8CCS6 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms