Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm7029-201ENSMUST00000173226 450 ntBASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm44958-201ENSMUST00000203734 736 ntBASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm5356-201ENSMUST00000093326 615 ntBASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm24830-201ENSMUST00000102024 166 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm23984-201ENSMUST00000157139 203 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm9136-201ENSMUST00000193368 454 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm6180-201ENSMUST00000065243 498 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm26232-201ENSMUST00000083360 166 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lysmd4Q8CC84 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms