Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm28646-201ENSMUST00000188220 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm28205-201ENSMUST00000189177 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm29032-201ENSMUST00000189797 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm28695-201ENSMUST00000190300 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm37448-201ENSMUST00000192795 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Gm11511-201ENSMUST00000118146 540 ntBASIC14.11□□□□□ -0.15
Shisa4Q8CA71 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.11□□□□□ -0.15
Shisa4Q8CA71 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.11□□□□□ -0.15
Shisa4Q8CA71 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Gm9192-201ENSMUST00000183221 985 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Gm5051-201ENSMUST00000204085 485 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Gm44545-201ENSMUST00000208262 746 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Gm17827-201ENSMUST00000211825 742 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa4Q8CA71 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms