Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm14193-201ENSMUST00000105067 153 ntBASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm12628-201ENSMUST00000122193 382 ntBASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm42657-201ENSMUST00000201746 211 ntBASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm26013-201ENSMUST00000104404 119 ntBASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm11836-201ENSMUST00000121022 441 ntBASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm37458-201ENSMUST00000194055 410 ntBASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a6Q8C6K9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a6Q8C6K9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a6Q8C6K9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a6Q8C6K9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a6Q8C6K9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a6Q8C6K9 Gm10176-201ENSMUST00000159707 2264 ntBASIC11□□□□□ -0.65
Col6a6Q8C6K9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col6a6Q8C6K9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Col6a6Q8C6K9 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms