Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Gm15615-201ENSMUST00000118876 198 ntBASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Gm19015-201ENSMUST00000184002 1189 ntBASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Mir8093-201ENSMUST00000185043 137 ntBASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Gm9884-201ENSMUST00000194343 1222 ntBASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 CT573086.4-201ENSMUST00000226729 342 ntBASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Gm24248-201ENSMUST00000157321 322 ntBASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Gm42816-201ENSMUST00000198433 325 ntBASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col16a1Q8BLX7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm14807-201ENSMUST00000116640 983 ntBASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm17192-201ENSMUST00000169031 511 ntBASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm17825-201ENSMUST00000206836 794 ntBASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm45758-201ENSMUST00000212448 1006 ntBASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 CT025602.2-201ENSMUST00000226553 772 ntBASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm5641-201ENSMUST00000091130 1488 ntBASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.71■□□□□ 0.11
Col16a1Q8BLX7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col16a1Q8BLX7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Col16a1Q8BLX7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col16a1Q8BLX7 Gm21759-201ENSMUST00000178345 1828 ntBASIC15.71■□□□□ 0.1
Col16a1Q8BLX7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col16a1Q8BLX7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm25053-201ENSMUST00000103982 133 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm25922-201ENSMUST00000104281 130 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm12791-201ENSMUST00000120788 655 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm24679-201ENSMUST00000158762 111 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms