Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2bQ8BJF9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm12502-201ENSMUST00000120197 444 ntBASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm8018-201ENSMUST00000173536 789 ntBASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm29649-201ENSMUST00000185649 419 ntBASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm6007-201ENSMUST00000208170 823 ntBASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm22058-201ENSMUST00000083393 310 ntBASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2bQ8BJF9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Gm16177-201ENSMUST00000120728 718 ntBASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Gm4034-201ENSMUST00000187674 480 ntBASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms