Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh20Q8BIZ0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh20Q8BIZ0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh20Q8BIZ0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh20Q8BIZ0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh20Q8BIZ0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Gm13786-201ENSMUST00000122371 333 ntBASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Mospd4-201ENSMUST00000180618 576 ntBASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh20Q8BIZ0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Gm12241-201ENSMUST00000118330 726 ntBASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Gm13492-201ENSMUST00000119772 665 ntBASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Gm8738-201ENSMUST00000172606 329 ntBASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Olfr582-201ENSMUST00000098212 960 ntBASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh20Q8BIZ0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms