Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gm9083-201ENSMUST00000120423 819 ntBASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gm22058-201ENSMUST00000083393 310 ntBASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf38Q8BI21 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Gm1335-201ENSMUST00000121653 386 ntBASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Gm40466-201ENSMUST00000212174 422 ntBASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf38Q8BI21 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf38Q8BI21 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms