Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Gm19163-201ENSMUST00000223313 780 ntBASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim6Q8BGE7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Gm27331-201ENSMUST00000183705 60 ntBASIC12.98□□□□□ -0.33
Trim6Q8BGE7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim6Q8BGE7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Gm23984-201ENSMUST00000157139 203 ntBASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.97□□□□□ -0.33
Trim6Q8BGE7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.97□□□□□ -0.33
Trim6Q8BGE7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.97□□□□□ -0.33
Trim6Q8BGE7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim6Q8BGE7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim6Q8BGE7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms