Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.28□□□□□ -0.44
Usp8Q80U87 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.28□□□□□ -0.44
Usp8Q80U87 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.28□□□□□ -0.44
Usp8Q80U87 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.28□□□□□ -0.44
Usp8Q80U87 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.28□□□□□ -0.44
Usp8Q80U87 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp8Q80U87 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.28□□□□□ -0.44
Usp8Q80U87 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Usp8Q80U87 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usp8Q80U87 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Usp8Q80U87 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Usp8Q80U87 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.27□□□□□ -0.44
Usp8Q80U87 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usp8Q80U87 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Gm24231-201ENSMUST00000104315 133 ntBASIC12.27□□□□□ -0.45
Usp8Q80U87 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.27□□□□□ -0.45
Usp8Q80U87 Gm17150-201ENSMUST00000165577 381 ntBASIC12.27□□□□□ -0.45
Usp8Q80U87 Gm7063-201ENSMUST00000186840 981 ntBASIC12.27□□□□□ -0.45
Usp8Q80U87 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Gm40466-201ENSMUST00000212174 422 ntBASIC12.27□□□□□ -0.45
Usp8Q80U87 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Usp8Q80U87 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.27□□□□□ -0.45
Usp8Q80U87 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.27□□□□□ -0.45
Usp8Q80U87 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usp8Q80U87 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.27□□□□□ -0.45
Usp8Q80U87 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Usp8Q80U87 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp8Q80U87 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp8Q80U87 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp8Q80U87 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms