Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rmrp-201ENSMUST00000157463 271 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm23699-201ENSMUST00000158835 135 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm18734-201ENSMUST00000172937 808 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm3508-201ENSMUST00000186012 792 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm9230-201ENSMUST00000188228 532 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm7848-201ENSMUST00000210739 718 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Thoc7-209ENSMUST00000225325 765 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.39□□□□□ -0.59
Pif1Q80SX8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pif1Q80SX8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Gm23949-201ENSMUST00000104027 127 ntBASIC11.38□□□□□ -0.59
Pif1Q80SX8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.38□□□□□ -0.59
Pif1Q80SX8 Gm9550-201ENSMUST00000161130 862 ntBASIC11.38□□□□□ -0.59
Pif1Q80SX8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Gm28071-201ENSMUST00000190355 478 ntBASIC11.38□□□□□ -0.59
Pif1Q80SX8 AY036118-201ENSMUST00000200021 923 ntBASIC11.38□□□□□ -0.59
Pif1Q80SX8 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.38□□□□□ -0.59
Pif1Q80SX8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.38□□□□□ -0.59
Pif1Q80SX8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.38□□□□□ -0.59
Pif1Q80SX8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pif1Q80SX8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.37□□□□□ -0.59
Pif1Q80SX8 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.37□□□□□ -0.59
Pif1Q80SX8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm15711-201ENSMUST00000118889 535 ntBASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.37□□□□□ -0.59
Pif1Q80SX8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms