Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Vma21Q78T54 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Vma21Q78T54 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Vma21Q78T54 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vma21Q78T54 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Vma21Q78T54 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Vma21Q78T54 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.93□□□□□ -0.82
Vma21Q78T54 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm12502-201ENSMUST00000120197 444 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm13315-201ENSMUST00000120376 991 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm9083-201ENSMUST00000120423 819 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.93□□□□□ -0.82
Vma21Q78T54 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm9794-201ENSMUST00000202370 423 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm44958-201ENSMUST00000203734 736 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gm22058-201ENSMUST00000083393 310 ntBASIC9.93□□□□□ -0.82
Vma21Q78T54 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Vma21Q78T54 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Vma21Q78T54 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Vma21Q78T54 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.92□□□□□ -0.82
Vma21Q78T54 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Gm11478-201ENSMUST00000117851 599 ntBASIC9.92□□□□□ -0.82
Vma21Q78T54 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.92□□□□□ -0.82
Vma21Q78T54 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Gm44405-201ENSMUST00000198952 126 ntBASIC9.92□□□□□ -0.82
Vma21Q78T54 Gm18584-201ENSMUST00000203098 964 ntBASIC9.92□□□□□ -0.82
Vma21Q78T54 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Vma21Q78T54 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms