Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm26013-201ENSMUST00000104404 119 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm12628-201ENSMUST00000122193 382 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm44506-201ENSMUST00000206278 965 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm19009-201ENSMUST00000223072 823 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Gm12407-201ENSMUST00000180219 324 ntBASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Gm38117-201ENSMUST00000194653 939 ntBASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx55Q6ZPL9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms