Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ShbQ6PD21 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
ShbQ6PD21 Gm11996-201ENSMUST00000117538 915 ntBASIC13.04□□□□□ -0.32
ShbQ6PD21 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.04□□□□□ -0.32
ShbQ6PD21 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.04□□□□□ -0.32
ShbQ6PD21 Gm24809-201ENSMUST00000175318 271 ntBASIC13.04□□□□□ -0.32
ShbQ6PD21 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Gm43671-201ENSMUST00000200422 433 ntBASIC13.04□□□□□ -0.32
ShbQ6PD21 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
ShbQ6PD21 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ShbQ6PD21 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.04□□□□□ -0.32
ShbQ6PD21 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ShbQ6PD21 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ShbQ6PD21 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ShbQ6PD21 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.04□□□□□ -0.32
ShbQ6PD21 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.04□□□□□ -0.32
ShbQ6PD21 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Gm12663-201ENSMUST00000118481 958 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 Gm14395-201ENSMUST00000120494 563 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Gm8197-202ENSMUST00000193422 934 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Gm17931-201ENSMUST00000208132 634 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ShbQ6PD21 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.03□□□□□ -0.32
ShbQ6PD21 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ShbQ6PD21 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShbQ6PD21 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.02□□□□□ -0.32
ShbQ6PD21 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ShbQ6PD21 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.02□□□□□ -0.32
ShbQ6PD21 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShbQ6PD21 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShbQ6PD21 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.02□□□□□ -0.32
ShbQ6PD21 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ShbQ6PD21 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShbQ6PD21 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ShbQ6PD21 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
ShbQ6PD21 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ShbQ6PD21 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ShbQ6PD21 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
ShbQ6PD21 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ShbQ6PD21 Gm42511-201ENSMUST00000196160 234 ntBASIC13.02□□□□□ -0.33
ShbQ6PD21 Gm7504-201ENSMUST00000201449 424 ntBASIC13.02□□□□□ -0.33
ShbQ6PD21 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms