Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Gm28882-201ENSMUST00000185504 314 ntBASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Gm14832-201ENSMUST00000121289 322 ntBASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Gm13786-201ENSMUST00000122371 333 ntBASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 AY702102-202ENSMUST00000194651 1173 ntBASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Gm10608-202ENSMUST00000213924 676 ntBASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.38□□□□□ -0.43
Sp140Q6NSQ5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sp140Q6NSQ5 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms