Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt40Q6IFX3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm11663-201ENSMUST00000117888 290 ntBASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm13611-201ENSMUST00000118269 318 ntBASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm8199-201ENSMUST00000121323 823 ntBASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm37246-201ENSMUST00000192665 835 ntBASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.31□□□□□ -0.12
Krt40Q6IFX3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm1821-202ENSMUST00000227415 750 ntBASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Ntng1-201ENSMUST00000051253 327 ntBASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.3□□□□□ -0.12
Krt40Q6IFX3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms