Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Gm12247-201ENSMUST00000117585 670 ntBASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Gm42748-201ENSMUST00000199354 2341 ntBASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Smarca2Q6DIC0 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm8146-201ENSMUST00000192106 1847 ntBASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm38385-201ENSMUST00000194454 2351 ntBASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm11957-201ENSMUST00000118304 779 ntBASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm23675-201ENSMUST00000157311 125 ntBASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm34379-201ENSMUST00000195036 290 ntBASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC20.85■□□□□ 0.93
Smarca2Q6DIC0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm15620-201ENSMUST00000122949 270 ntBASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm24954-201ENSMUST00000178831 110 ntBASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm7741-201ENSMUST00000181445 989 ntBASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm43163-201ENSMUST00000196571 442 ntBASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm43671-201ENSMUST00000200422 433 ntBASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm5996-201ENSMUST00000211110 718 ntBASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Gm8522-201ENSMUST00000118416 1929 ntBASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Smarca2Q6DIC0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarca2Q6DIC0 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 Gm16167-201ENSMUST00000160428 1065 ntBASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 Gm7002-201ENSMUST00000221386 2165 ntBASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smarca2Q6DIC0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms