Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm7719-201ENSMUST00000182374 975 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
Scn9aQ62205 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm7504-201ENSMUST00000201449 424 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 AC130477.1-201ENSMUST00000226982 420 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Scn9aQ62205 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Scn9aQ62205 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn9aQ62205 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.1□□□□□ -0.15
Scn9aQ62205 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn9aQ62205 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.1□□□□□ -0.15
Scn9aQ62205 Gm8459-201ENSMUST00000162504 760 ntBASIC14.1□□□□□ -0.15
Scn9aQ62205 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Gm5700-201ENSMUST00000191483 989 ntBASIC14.1□□□□□ -0.15
Scn9aQ62205 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.1□□□□□ -0.15
Scn9aQ62205 Gm5870-201ENSMUST00000196461 282 ntBASIC14.1□□□□□ -0.15
Scn9aQ62205 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Scn9aQ62205 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scn9aQ62205 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scn9aQ62205 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.1□□□□□ -0.15
Scn9aQ62205 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scn9aQ62205 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn9aQ62205 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Scn9aQ62205 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Scn9aQ62205 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm12453-201ENSMUST00000121981 331 ntBASIC14.09□□□□□ -0.15
Scn9aQ62205 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.09□□□□□ -0.15
Scn9aQ62205 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm43752-201ENSMUST00000198475 697 ntBASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm29763-201ENSMUST00000205306 616 ntBASIC14.09□□□□□ -0.15
Scn9aQ62205 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.09□□□□□ -0.15
Scn9aQ62205 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scn9aQ62205 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.09□□□□□ -0.15
Scn9aQ62205 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm9089-201ENSMUST00000122027 526 ntBASIC14.09□□□□□ -0.15
Scn9aQ62205 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn9aQ62205 Gm44124-201ENSMUST00000204159 472 ntBASIC14.09□□□□□ -0.15
Scn9aQ62205 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn9aQ62205 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scn9aQ62205 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn9aQ62205 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Scn9aQ62205 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Scn9aQ62205 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn9aQ62205 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn9aQ62205 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms