Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctr9Q62018 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctr9Q62018 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctr9Q62018 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ctr9Q62018 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ctr9Q62018 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Ctr9Q62018 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.43□□□□□ -0.1
Ctr9Q62018 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ctr9Q62018 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ctr9Q62018 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.43□□□□□ -0.1
Ctr9Q62018 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ctr9Q62018 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ctr9Q62018 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.43□□□□□ -0.1
Ctr9Q62018 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctr9Q62018 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.42□□□□□ -0.1
Ctr9Q62018 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.42□□□□□ -0.1
Ctr9Q62018 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Gm7857-201ENSMUST00000117957 358 ntBASIC14.42□□□□□ -0.1
Ctr9Q62018 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Gm44882-201ENSMUST00000205702 802 ntBASIC14.42□□□□□ -0.1
Ctr9Q62018 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.42□□□□□ -0.1
Ctr9Q62018 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.42□□□□□ -0.1
Ctr9Q62018 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.42□□□□□ -0.1
Ctr9Q62018 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Ctr9Q62018 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctr9Q62018 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.41□□□□□ -0.1
Ctr9Q62018 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Gm12217-201ENSMUST00000118858 696 ntBASIC14.41□□□□□ -0.1
Ctr9Q62018 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.41□□□□□ -0.1
Ctr9Q62018 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.41□□□□□ -0.1
Ctr9Q62018 Rps4l-202ENSMUST00000204242 789 ntBASIC14.41□□□□□ -0.1
Ctr9Q62018 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.41□□□□□ -0.1
Ctr9Q62018 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.41□□□□□ -0.1
Ctr9Q62018 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.41□□□□□ -0.1
Ctr9Q62018 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ctr9Q62018 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.41□□□□□ -0.1
Ctr9Q62018 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.41□□□□□ -0.1
Ctr9Q62018 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ctr9Q62018 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.41□□□□□ -0.1
Ctr9Q62018 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctr9Q62018 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms