Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.31□□□□□ -0.44
Six4Q61321 Gm44651-201ENSMUST00000207343 372 ntBASIC12.31□□□□□ -0.44
Six4Q61321 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.31□□□□□ -0.44
Six4Q61321 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.31□□□□□ -0.44
Six4Q61321 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.31□□□□□ -0.44
Six4Q61321 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Six4Q61321 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six4Q61321 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.31□□□□□ -0.44
Six4Q61321 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Six4Q61321 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.3□□□□□ -0.44
Six4Q61321 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.3□□□□□ -0.44
Six4Q61321 Gm13665-201ENSMUST00000120830 528 ntBASIC12.3□□□□□ -0.44
Six4Q61321 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.3□□□□□ -0.44
Six4Q61321 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Six4Q61321 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.3□□□□□ -0.44
Six4Q61321 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.3□□□□□ -0.44
Six4Q61321 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.3□□□□□ -0.44
Six4Q61321 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.3□□□□□ -0.44
Six4Q61321 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Six4Q61321 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Six4Q61321 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Six4Q61321 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six4Q61321 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Six4Q61321 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Six4Q61321 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.29□□□□□ -0.44
Six4Q61321 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.29□□□□□ -0.44
Six4Q61321 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.29□□□□□ -0.44
Six4Q61321 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.29□□□□□ -0.44
Six4Q61321 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Six4Q61321 Gm13296-201ENSMUST00000117854 997 ntBASIC12.29□□□□□ -0.44
Six4Q61321 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.29□□□□□ -0.44
Six4Q61321 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.29□□□□□ -0.44
Six4Q61321 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Six4Q61321 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Six4Q61321 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Six4Q61321 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.29□□□□□ -0.44
Six4Q61321 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Six4Q61321 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Six4Q61321 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.29□□□□□ -0.44
Six4Q61321 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Six4Q61321 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six4Q61321 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.29□□□□□ -0.44
Six4Q61321 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms