Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
ClpbQ60649 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Gm11531-201ENSMUST00000117614 555 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Gm13875-201ENSMUST00000120162 282 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Gm5950-201ENSMUST00000213337 772 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ClpbQ60649 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ClpbQ60649 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
ClpbQ60649 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Gm22323-201ENSMUST00000103832 109 ntBASIC11.73□□□□□ -0.53
ClpbQ60649 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.73□□□□□ -0.53
ClpbQ60649 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Rmrp-201ENSMUST00000157463 271 ntBASIC11.73□□□□□ -0.53
ClpbQ60649 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
ClpbQ60649 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
ClpbQ60649 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.73□□□□□ -0.53
ClpbQ60649 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.73□□□□□ -0.53
ClpbQ60649 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.73□□□□□ -0.53
ClpbQ60649 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.73□□□□□ -0.53
ClpbQ60649 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.73□□□□□ -0.53
ClpbQ60649 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms