Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Gm27243-201ENSMUST00000183964 521 ntBASIC11.66□□□□□ -0.54
Nr1h4Q60641 Gm4034-201ENSMUST00000187674 480 ntBASIC11.66□□□□□ -0.54
Nr1h4Q60641 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nr1h4Q60641 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.66□□□□□ -0.54
Nr1h4Q60641 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gm11814-201ENSMUST00000119515 929 ntBASIC11.65□□□□□ -0.54
Nr1h4Q60641 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gm11918-201ENSMUST00000121660 179 ntBASIC11.65□□□□□ -0.54
Nr1h4Q60641 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gm4271-201ENSMUST00000174444 973 ntBASIC11.65□□□□□ -0.54
Nr1h4Q60641 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.65□□□□□ -0.54
Nr1h4Q60641 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Nr1h4Q60641 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.65□□□□□ -0.54
Nr1h4Q60641 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.65□□□□□ -0.54
Nr1h4Q60641 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nr1h4Q60641 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.65□□□□□ -0.55
Nr1h4Q60641 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Nr1h4Q60641 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.64□□□□□ -0.55
Nr1h4Q60641 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.64□□□□□ -0.55
Nr1h4Q60641 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Gm6244-201ENSMUST00000178732 841 ntBASIC11.64□□□□□ -0.55
Nr1h4Q60641 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Gm6007-201ENSMUST00000208170 823 ntBASIC11.64□□□□□ -0.55
Nr1h4Q60641 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms