Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.25□□□□□ -0.13
Prdm1Q60636 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.25□□□□□ -0.13
Prdm1Q60636 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prdm1Q60636 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Prdm1Q60636 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.24□□□□□ -0.13
Prdm1Q60636 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.24□□□□□ -0.13
Prdm1Q60636 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prdm1Q60636 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Prdm1Q60636 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Gm13665-201ENSMUST00000120830 528 ntBASIC14.23□□□□□ -0.13
Prdm1Q60636 Gm12164-201ENSMUST00000121695 551 ntBASIC14.23□□□□□ -0.13
Prdm1Q60636 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prdm1Q60636 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.23□□□□□ -0.13
Prdm1Q60636 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm13296-201ENSMUST00000117854 997 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms