Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm29615-201ENSMUST00000185371 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm28224-201ENSMUST00000186078 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm29001-201ENSMUST00000186177 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm28292-201ENSMUST00000186593 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm28101-201ENSMUST00000187608 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm29076-201ENSMUST00000187689 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm28302-201ENSMUST00000187931 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm28646-201ENSMUST00000188220 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm28205-201ENSMUST00000189177 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm29032-201ENSMUST00000189797 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm28695-201ENSMUST00000190300 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm37448-201ENSMUST00000192795 697 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm4607-201ENSMUST00000206649 577 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 AY036118-201ENSMUST00000200021 923 ntBASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps54Q5SPW0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.63□□□□□ -0.07
Vps54Q5SPW0 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Gm27627-201ENSMUST00000183644 150 ntBASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Gm5363-201ENSMUST00000211927 938 ntBASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms