Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Mir1901-201ENSMUST00000122616 78 ntBASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Gm6991-201ENSMUST00000218475 1178 ntBASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc85aQ5SP85 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Gm12899-201ENSMUST00000120565 551 ntBASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Gm23119-201ENSMUST00000158610 140 ntBASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Gm37299-201ENSMUST00000193951 826 ntBASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Gm9645-201ENSMUST00000197131 792 ntBASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Gm9797-202ENSMUST00000218003 294 ntBASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc85aQ5SP85 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85aQ5SP85 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Gm15566-201ENSMUST00000121130 590 ntBASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Rprl1-201ENSMUST00000158050 327 ntBASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Gm45575-201ENSMUST00000210283 548 ntBASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85aQ5SP85 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms