Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.43□□□□□ -0.58
Trim40Q3UWA4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Gm7488-201ENSMUST00000117148 684 ntBASIC11.43□□□□□ -0.58
Trim40Q3UWA4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim40Q3UWA4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm8805-201ENSMUST00000117848 313 ntBASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm22121-201ENSMUST00000175148 54 ntBASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm4034-201ENSMUST00000187674 480 ntBASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm24136-201ENSMUST00000083374 165 ntBASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim40Q3UWA4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms