Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Gm22146-201ENSMUST00000157397 288 ntBASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm6630-201ENSMUST00000119199 454 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm12030-201ENSMUST00000121917 223 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.28□□□□□ -0.44
Fam196aQ3USH1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms