Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nlrc4Q3UP24 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm23912-201ENSMUST00000104687 87 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm13296-201ENSMUST00000117854 997 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm7722-201ENSMUST00000120646 741 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm14247-201ENSMUST00000120950 237 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm44262-201ENSMUST00000204969 372 ntBASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nlrc4Q3UP24 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Gm26361-201ENSMUST00000158868 186 ntBASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Gm45186-201ENSMUST00000206874 478 ntBASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms