Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cks1brtQ3UNC9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Nrn1-204ENSMUST00000224323 1779 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm7967-202ENSMUST00000191042 5042 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm14140-201ENSMUST00000119999 995 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm18766-201ENSMUST00000189811 808 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm38140-201ENSMUST00000193617 2755 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Btrc-209ENSMUST00000224478 2194 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Gm43267-201ENSMUST00000199664 1796 ntBASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cks1brtQ3UNC9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Gm28033-201ENSMUST00000184224 96 ntBASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Gm27741-201ENSMUST00000185060 237 ntBASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Gm6458-201ENSMUST00000211573 635 ntBASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cks1brtQ3UNC9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms