Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm23105-201ENSMUST00000083719 134 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm5419-201ENSMUST00000119301 527 ntBASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm24294-201ENSMUST00000158295 277 ntBASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm8574-201ENSMUST00000203207 924 ntBASIC11.19□□□□□ -0.62
Spg11Q3UHA3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.19□□□□□ -0.62
Spg11Q3UHA3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Spg11Q3UHA3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm25562-201ENSMUST00000104608 133 ntBASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm14395-201ENSMUST00000120494 563 ntBASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm43380-201ENSMUST00000200421 220 ntBASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm44216-201ENSMUST00000203942 157 ntBASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm18256-201ENSMUST00000209087 907 ntBASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms