Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Mir705-201ENSMUST00000102058 82 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm15136-201ENSMUST00000120552 533 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf180Q3U827 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm26047-201ENSMUST00000157308 113 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm17782-201ENSMUST00000174345 880 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm7572-201ENSMUST00000182616 766 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm26047-202ENSMUST00000198840 115 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf180Q3U827 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC14.17□□□□□ -0.14
Rnf180Q3U827 AC117769.1-201ENSMUST00000224716 1120 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.17□□□□□ -0.14
Rnf180Q3U827 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf180Q3U827 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.16□□□□□ -0.14
Rnf180Q3U827 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Gm22495-201ENSMUST00000104492 126 ntBASIC14.16□□□□□ -0.14
Rnf180Q3U827 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC14.16□□□□□ -0.14
Rnf180Q3U827 Gm11952-201ENSMUST00000121172 821 ntBASIC14.16□□□□□ -0.14
Rnf180Q3U827 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Gm5976-201ENSMUST00000180794 996 ntBASIC14.16□□□□□ -0.14
Rnf180Q3U827 Gm42751-201ENSMUST00000198065 559 ntBASIC14.16□□□□□ -0.14
Rnf180Q3U827 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.16□□□□□ -0.14
Rnf180Q3U827 AC154213.1-201ENSMUST00000228234 583 ntBASIC14.16□□□□□ -0.14
Rnf180Q3U827 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf180Q3U827 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Gm42970-201ENSMUST00000196407 1352 ntBASIC14.15□□□□□ -0.14
Rnf180Q3U827 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.15□□□□□ -0.14
Rnf180Q3U827 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Cd9-ps-201ENSMUST00000174687 650 ntBASIC14.15□□□□□ -0.14
Rnf180Q3U827 Gm6216-201ENSMUST00000182390 687 ntBASIC14.15□□□□□ -0.14
Rnf180Q3U827 Gm8824-201ENSMUST00000182962 990 ntBASIC14.15□□□□□ -0.14
Rnf180Q3U827 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf180Q3U827 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms