Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm12742-201ENSMUST00000117326 410 ntBASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm9083-201ENSMUST00000120423 819 ntBASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm43818-201ENSMUST00000200605 466 ntBASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43aQ3TL54 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gm13492-201ENSMUST00000119772 665 ntBASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gm18304-201ENSMUST00000189162 546 ntBASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gm9899-201ENSMUST00000065519 555 ntBASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43aQ3TL54 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim43aQ3TL54 Gm13315-201ENSMUST00000120376 991 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms