Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Gm11978-201ENSMUST00000122315 466 ntBASIC10.84□□□□□ -0.67
Rab42Q0PD08 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Gm38671-201ENSMUST00000200573 130 ntBASIC10.84□□□□□ -0.67
Rab42Q0PD08 Gm7287-201ENSMUST00000205267 602 ntBASIC10.84□□□□□ -0.67
Rab42Q0PD08 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Gm9908-201ENSMUST00000211534 448 ntBASIC10.84□□□□□ -0.67
Rab42Q0PD08 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.84□□□□□ -0.67
Rab42Q0PD08 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.84□□□□□ -0.67
Rab42Q0PD08 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.84□□□□□ -0.67
Rab42Q0PD08 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.84□□□□□ -0.67
Rab42Q0PD08 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.84□□□□□ -0.67
Rab42Q0PD08 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab42Q0PD08 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gm13612-201ENSMUST00000119276 390 ntBASIC10.83□□□□□ -0.68
Rab42Q0PD08 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gm6745-201ENSMUST00000199216 526 ntBASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gm45384-201ENSMUST00000210451 277 ntBASIC10.83□□□□□ -0.68
Rab42Q0PD08 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab42Q0PD08 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.82□□□□□ -0.68
Rab42Q0PD08 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.82□□□□□ -0.68
Rab42Q0PD08 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.82□□□□□ -0.68
Rab42Q0PD08 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rab42Q0PD08 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms