Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm6905-201ENSMUST00000205729 511 ntBASIC11.73□□□□□ -0.53
Hoxc4Q08624 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Gm10288-201ENSMUST00000084614 537 ntBASIC11.73□□□□□ -0.53
Hoxc4Q08624 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxc4Q08624 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm22902-201ENSMUST00000158488 302 ntBASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm23699-201ENSMUST00000158835 135 ntBASIC11.72□□□□□ -0.53
Hoxc4Q08624 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm19287-201ENSMUST00000203190 358 ntBASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc4Q08624 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm12165-201ENSMUST00000117047 342 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm12036-201ENSMUST00000120008 530 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hoxc4Q08624 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm27390-201ENSMUST00000184516 176 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm19353-201ENSMUST00000184561 445 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm43947-201ENSMUST00000203019 959 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm17931-201ENSMUST00000208132 634 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Gm8959-201ENSMUST00000213150 571 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.71□□□□□ -0.53
Hoxc4Q08624 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc4Q08624 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Hoxc4Q08624 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.71□□□□□ -0.54
Hoxc4Q08624 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.71□□□□□ -0.54
Hoxc4Q08624 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Hoxc4Q08624 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms