Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.03□□□□□ -0.48
Sox4Q06831 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox4Q06831 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox4Q06831 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox4Q06831 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox4Q06831 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Sox4Q06831 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox4Q06831 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox4Q06831 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sox4Q06831 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sox4Q06831 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox4Q06831 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.02□□□□□ -0.48
Sox4Q06831 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox4Q06831 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sox4Q06831 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox4Q06831 Gm14130-201ENSMUST00000118417 987 ntBASIC12.02□□□□□ -0.49
Sox4Q06831 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.02□□□□□ -0.49
Sox4Q06831 Rprl1-201ENSMUST00000158050 327 ntBASIC12.02□□□□□ -0.49
Sox4Q06831 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.02□□□□□ -0.49
Sox4Q06831 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox4Q06831 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox4Q06831 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sox4Q06831 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Sox4Q06831 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sox4Q06831 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox4Q06831 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox4Q06831 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox4Q06831 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox4Q06831 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.01□□□□□ -0.49
Sox4Q06831 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.01□□□□□ -0.49
Sox4Q06831 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.01□□□□□ -0.49
Sox4Q06831 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.01□□□□□ -0.49
Sox4Q06831 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox4Q06831 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox4Q06831 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox4Q06831 Gm2383-201ENSMUST00000181461 807 ntBASIC12.01□□□□□ -0.49
Sox4Q06831 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox4Q06831 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox4Q06831 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.01□□□□□ -0.49
Sox4Q06831 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.01□□□□□ -0.49
Sox4Q06831 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.01□□□□□ -0.49
Sox4Q06831 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox4Q06831 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox4Q06831 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox4Q06831 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms