Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm24830-201ENSMUST00000102024 166 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm37259-201ENSMUST00000193903 849 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm9996-201ENSMUST00000070359 913 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm26232-201ENSMUST00000083360 166 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col10a1Q05306 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.28□□□□□ -0.6
Col10a1Q05306 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.28□□□□□ -0.6
Col10a1Q05306 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col10a1Q05306 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Col10a1Q05306 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col10a1Q05306 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col10a1Q05306 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col10a1Q05306 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col10a1Q05306 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col10a1Q05306 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Col10a1Q05306 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col10a1Q05306 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Gm22323-201ENSMUST00000103832 109 ntBASIC11.27□□□□□ -0.61
Col10a1Q05306 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Gm14109-201ENSMUST00000118814 309 ntBASIC11.27□□□□□ -0.61
Col10a1Q05306 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.27□□□□□ -0.61
Col10a1Q05306 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.27□□□□□ -0.61
Col10a1Q05306 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.27□□□□□ -0.61
Col10a1Q05306 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Col10a1Q05306 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col10a1Q05306 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.27□□□□□ -0.61
Col10a1Q05306 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms