Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm14644-201ENSMUST00000116671 647 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm13996-201ENSMUST00000118456 430 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm2260-201ENSMUST00000184965 657 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Rprl1-202ENSMUST00000198476 238 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm19187-201ENSMUST00000206781 892 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm44651-201ENSMUST00000207343 372 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx3-2P97503 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx3-2P97503 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx3-2P97503 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx3-2P97503 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Nkx3-2P97503 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm11439-201ENSMUST00000118598 409 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm18827-201ENSMUST00000188341 790 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.58□□□□□ -0.56
Nkx3-2P97503 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms