Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pkp1P97350 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.24□□□□□ -0.13
Pkp1P97350 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.24□□□□□ -0.13
Pkp1P97350 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Gm7722-201ENSMUST00000120646 741 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pkp1P97350 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.24□□□□□ -0.13
Pkp1P97350 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Pkp1P97350 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pkp1P97350 Gm9368-201ENSMUST00000219348 831 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.24□□□□□ -0.13
Pkp1P97350 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pkp1P97350 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pkp1P97350 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.24□□□□□ -0.13
Pkp1P97350 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkp1P97350 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pkp1P97350 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.23□□□□□ -0.13
Pkp1P97350 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pkp1P97350 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pkp1P97350 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Gm12241-201ENSMUST00000118330 726 ntBASIC14.23□□□□□ -0.13
Pkp1P97350 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.23□□□□□ -0.13
Pkp1P97350 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.23□□□□□ -0.13
Pkp1P97350 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pkp1P97350 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.23□□□□□ -0.13
Pkp1P97350 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Gm26956-201ENSMUST00000182176 986 ntBASIC14.23□□□□□ -0.13
Pkp1P97350 Gm18711-201ENSMUST00000199341 750 ntBASIC14.23□□□□□ -0.13
Pkp1P97350 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.23□□□□□ -0.13
Pkp1P97350 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.23□□□□□ -0.13
Pkp1P97350 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.23□□□□□ -0.13
Pkp1P97350 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.23□□□□□ -0.13
Pkp1P97350 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.23□□□□□ -0.13
Pkp1P97350 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkp1P97350 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.22□□□□□ -0.13
Pkp1P97350 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pkp1P97350 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pkp1P97350 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms