Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
PrkdcP97313 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Gm2566-201ENSMUST00000201267 431 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Gm7183-201ENSMUST00000213870 1005 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Gm6189-201ENSMUST00000164487 2082 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
PrkdcP97313 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
PrkdcP97313 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
PrkdcP97313 Gm14165-201ENSMUST00000121456 952 ntBASIC8.02□□□□□ -1.12
PrkdcP97313 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
PrkdcP97313 Gm4034-201ENSMUST00000187674 480 ntBASIC8.02□□□□□ -1.12
PrkdcP97313 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
PrkdcP97313 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
PrkdcP97313 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
PrkdcP97313 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC8.02□□□□□ -1.13
PrkdcP97313 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
PrkdcP97313 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm6560-201ENSMUST00000198588 1591 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
PrkdcP97313 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC8.02□□□□□ -1.13
PrkdcP97313 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm9372-201ENSMUST00000168454 430 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm5291-201ENSMUST00000201965 899 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 Gm7727-201ENSMUST00000219830 671 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
PrkdcP97313 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC8.02□□□□□ -1.13
PrkdcP97313 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
PrkdcP97313 Defa-ps16-201ENSMUST00000121939 171 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm38145-201ENSMUST00000192319 693 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm8268-201ENSMUST00000209683 458 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm5468-202ENSMUST00000227851 682 ntBASIC8.02□□□□□ -1.13
PrkdcP97313 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC8.02□□□□□ -1.13
PrkdcP97313 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
PrkdcP97313 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
PrkdcP97313 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC8.02□□□□□ -1.13
PrkdcP97313 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
PrkdcP97313 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC8.02□□□□□ -1.13
PrkdcP97313 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PrkdcP97313 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC8.01□□□□□ -1.13
PrkdcP97313 Gm5278-201ENSMUST00000055957 552 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.01□□□□□ -1.13
PrkdcP97313 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PrkdcP97313 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms