Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.39□□□□□ -0.59
SgcdP82347 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcdP82347 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SgcdP82347 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcdP82347 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.38□□□□□ -0.59
SgcdP82347 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SgcdP82347 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.38□□□□□ -0.59
SgcdP82347 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Gm11524-201ENSMUST00000119349 807 ntBASIC11.38□□□□□ -0.59
SgcdP82347 Gm15376-201ENSMUST00000122258 783 ntBASIC11.38□□□□□ -0.59
SgcdP82347 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SgcdP82347 Gm27390-201ENSMUST00000184516 176 ntBASIC11.38□□□□□ -0.59
SgcdP82347 Gm2495-201ENSMUST00000191160 466 ntBASIC11.38□□□□□ -0.59
SgcdP82347 Gm7561-201ENSMUST00000211203 886 ntBASIC11.38□□□□□ -0.59
SgcdP82347 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.38□□□□□ -0.59
SgcdP82347 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.38□□□□□ -0.59
SgcdP82347 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.38□□□□□ -0.59
SgcdP82347 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.38□□□□□ -0.59
SgcdP82347 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SgcdP82347 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcdP82347 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SgcdP82347 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.37□□□□□ -0.59
SgcdP82347 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SgcdP82347 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcdP82347 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
SgcdP82347 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SgcdP82347 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.37□□□□□ -0.59
SgcdP82347 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Gm5370-201ENSMUST00000187187 574 ntBASIC11.37□□□□□ -0.59
SgcdP82347 Gm19184-201ENSMUST00000196798 928 ntBASIC11.37□□□□□ -0.59
SgcdP82347 Gm19078-201ENSMUST00000206311 727 ntBASIC11.37□□□□□ -0.59
SgcdP82347 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcdP82347 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.37□□□□□ -0.59
SgcdP82347 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SgcdP82347 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.37□□□□□ -0.59
SgcdP82347 Gm26315-201ENSMUST00000083890 321 ntBASIC11.37□□□□□ -0.59
SgcdP82347 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcdP82347 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms