Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 B9d1os-201ENSMUST00000137010 674 ntBASIC13.23□□□□□ -0.29
CiitaP79621 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Gm8343-201ENSMUST00000182705 994 ntBASIC13.23□□□□□ -0.29
CiitaP79621 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.23□□□□□ -0.29
CiitaP79621 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
CiitaP79621 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.23□□□□□ -0.29
CiitaP79621 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CiitaP79621 Gm7848-201ENSMUST00000210739 718 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.23□□□□□ -0.29
CiitaP79621 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CiitaP79621 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
CiitaP79621 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CiitaP79621 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.22□□□□□ -0.29
CiitaP79621 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CiitaP79621 Gm15515-201ENSMUST00000117827 822 ntBASIC13.22□□□□□ -0.29
CiitaP79621 Gm5419-201ENSMUST00000119301 527 ntBASIC13.22□□□□□ -0.29
CiitaP79621 Gm12566-201ENSMUST00000121479 359 ntBASIC13.22□□□□□ -0.29
CiitaP79621 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CiitaP79621 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CiitaP79621 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.22□□□□□ -0.29
CiitaP79621 Gm18893-201ENSMUST00000198416 943 ntBASIC13.22□□□□□ -0.29
CiitaP79621 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.22□□□□□ -0.29
CiitaP79621 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CiitaP79621 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.22□□□□□ -0.29
CiitaP79621 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.22□□□□□ -0.29
CiitaP79621 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CiitaP79621 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.21□□□□□ -0.29
CiitaP79621 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.21□□□□□ -0.29
CiitaP79621 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CiitaP79621 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.21□□□□□ -0.29
CiitaP79621 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CiitaP79621 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CiitaP79621 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CiitaP79621 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.21□□□□□ -0.29
CiitaP79621 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.21□□□□□ -0.29
CiitaP79621 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.21□□□□□ -0.29
CiitaP79621 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.21□□□□□ -0.29
CiitaP79621 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.21□□□□□ -0.29
CiitaP79621 Gm5706-201ENSMUST00000181525 993 ntBASIC13.21□□□□□ -0.29
CiitaP79621 Mir7677-201ENSMUST00000184226 67 ntBASIC13.21□□□□□ -0.29
CiitaP79621 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.21□□□□□ -0.29
CiitaP79621 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.21□□□□□ -0.29
CiitaP79621 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CiitaP79621 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.21□□□□□ -0.29
CiitaP79621 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CiitaP79621 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CiitaP79621 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CiitaP79621 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CiitaP79621 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CiitaP79621 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CiitaP79621 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.21□□□□□ -0.3
CiitaP79621 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CiitaP79621 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CiitaP79621 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CiitaP79621 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.2□□□□□ -0.3
CiitaP79621 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms