Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm12058-201ENSMUST00000118614 437 ntBASIC13.48□□□□□ -0.25
Hmgb1P63158 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.48□□□□□ -0.25
Hmgb1P63158 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Hmgb1P63158 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.48□□□□□ -0.25
Hmgb1P63158 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.48□□□□□ -0.25
Hmgb1P63158 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm24830-201ENSMUST00000102024 166 ntBASIC13.47□□□□□ -0.25
Hmgb1P63158 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm11424-201ENSMUST00000121929 829 ntBASIC13.47□□□□□ -0.25
Hmgb1P63158 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm45784-201ENSMUST00000188360 142 ntBASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.47□□□□□ -0.25
Hmgb1P63158 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm39404-201ENSMUST00000216350 313 ntBASIC13.47□□□□□ -0.25
Hmgb1P63158 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm26232-201ENSMUST00000083360 166 ntBASIC13.47□□□□□ -0.25
Hmgb1P63158 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.47□□□□□ -0.25
Hmgb1P63158 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb1P63158 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.47□□□□□ -0.25
Hmgb1P63158 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Hmgb1P63158 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.46□□□□□ -0.25
Hmgb1P63158 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Hmgb1P63158 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Hmgb1P63158 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Hmgb1P63158 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Hmgb1P63158 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.46□□□□□ -0.25
Hmgb1P63158 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Hmgb1P63158 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Gm14660-201ENSMUST00000119809 575 ntBASIC13.46□□□□□ -0.25
Hmgb1P63158 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.46□□□□□ -0.25
Hmgb1P63158 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb1P63158 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Hmgb1P63158 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms