Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ybx1P62960 Gm4607-201ENSMUST00000206649 577 ntBASIC12.52□□□□□ -0.41
Ybx1P62960 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.52□□□□□ -0.41
Ybx1P62960 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.52□□□□□ -0.41
Ybx1P62960 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ybx1P62960 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ybx1P62960 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.52□□□□□ -0.41
Ybx1P62960 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.52□□□□□ -0.41
Ybx1P62960 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.52□□□□□ -0.41
Ybx1P62960 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Ybx1P62960 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.52□□□□□ -0.41
Ybx1P62960 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ybx1P62960 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ybx1P62960 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Ybx1P62960 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Gm8199-201ENSMUST00000121323 823 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Rprl1-201ENSMUST00000158050 327 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ybx1P62960 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.51□□□□□ -0.41
Ybx1P62960 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Gm43916-201ENSMUST00000205062 967 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.51□□□□□ -0.41
Ybx1P62960 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.51□□□□□ -0.41
Ybx1P62960 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ybx1P62960 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.51□□□□□ -0.41
Ybx1P62960 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ybx1P62960 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.5□□□□□ -0.41
Ybx1P62960 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Ybx1P62960 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.5□□□□□ -0.41
Ybx1P62960 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.5□□□□□ -0.41
Ybx1P62960 Gm13888-201ENSMUST00000119148 422 ntBASIC12.5□□□□□ -0.41
Ybx1P62960 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.5□□□□□ -0.41
Ybx1P62960 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ybx1P62960 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ybx1P62960 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms