Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC8.68□□□□□ -1.02
Rpl39P62892 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC8.68□□□□□ -1.02
Rpl39P62892 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Gm42498-201ENSMUST00000199981 1372 ntBASIC8.68□□□□□ -1.02
Rpl39P62892 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Rpl39P62892 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl39P62892 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Gm3365-201ENSMUST00000216296 1480 ntBASIC8.68□□□□□ -1.02
Rpl39P62892 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
Rpl39P62892 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Rpl39P62892 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl39P62892 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl39P62892 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rpl39P62892 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl39P62892 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC8.67□□□□□ -1.02
Rpl39P62892 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rpl39P62892 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm16215-201ENSMUST00000161990 637 ntBASIC8.67□□□□□ -1.02
Rpl39P62892 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC8.67□□□□□ -1.02
Rpl39P62892 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC8.67□□□□□ -1.02
Rpl39P62892 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm9022-201ENSMUST00000182482 992 ntBASIC8.67□□□□□ -1.02
Rpl39P62892 Gm4034-201ENSMUST00000187674 480 ntBASIC8.67□□□□□ -1.02
Rpl39P62892 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm28631-201ENSMUST00000190740 334 ntBASIC8.67□□□□□ -1.02
Rpl39P62892 Gm37042-201ENSMUST00000193816 581 ntBASIC8.67□□□□□ -1.02
Rpl39P62892 Gm43823-201ENSMUST00000197391 1808 ntBASIC8.67□□□□□ -1.02
Rpl39P62892 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rpl39P62892 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl39P62892 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rpl39P62892 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39P62892 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC8.66□□□□□ -1.02
Rpl39P62892 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39P62892 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39P62892 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39P62892 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39P62892 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rpl39P62892 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl39P62892 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms