Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm37008-201ENSMUST00000195712 319 ntBASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm45331-201ENSMUST00000209868 554 ntBASIC10.79□□□□□ -0.68
Sec61a1P61620 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.79□□□□□ -0.68
Sec61a1P61620 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a1P61620 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a1P61620 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Gm2231-201ENSMUST00000125661 612 ntBASIC10.78□□□□□ -0.68
Sec61a1P61620 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.78□□□□□ -0.68
Sec61a1P61620 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Gm18054-201ENSMUST00000207539 555 ntBASIC10.78□□□□□ -0.68
Sec61a1P61620 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.78□□□□□ -0.68
Sec61a1P61620 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.78□□□□□ -0.68
Sec61a1P61620 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.78□□□□□ -0.68
Sec61a1P61620 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.78□□□□□ -0.68
Sec61a1P61620 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.78□□□□□ -0.68
Sec61a1P61620 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61a1P61620 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sec61a1P61620 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Sec61a1P61620 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sec61a1P61620 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Sec61a1P61620 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sec61a1P61620 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Sec61a1P61620 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sec61a1P61620 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sec61a1P61620 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a1P61620 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a1P61620 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a1P61620 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a1P61620 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sec61a1P61620 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a1P61620 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.77□□□□□ -0.69
Sec61a1P61620 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.77□□□□□ -0.69
Sec61a1P61620 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms