Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Sssca1P56873 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.86□□□□□ -0.83
Sssca1P56873 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.86□□□□□ -0.83
Sssca1P56873 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
Sssca1P56873 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Sssca1P56873 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.86□□□□□ -0.83
Sssca1P56873 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Sssca1P56873 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm11964-201ENSMUST00000120982 444 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm11918-201ENSMUST00000121660 179 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Sssca1P56873 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm8515-201ENSMUST00000194852 576 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm17794-201ENSMUST00000220252 955 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm5356-201ENSMUST00000093326 615 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.85□□□□□ -0.83
Sssca1P56873 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Sssca1P56873 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Sssca1P56873 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms