Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdx1P52946 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdx1P52946 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Pdx1P52946 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.07□□□□□ -0.48
Pdx1P52946 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pdx1P52946 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Gm14644-201ENSMUST00000116671 647 ntBASIC12.07□□□□□ -0.48
Pdx1P52946 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.07□□□□□ -0.48
Pdx1P52946 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pdx1P52946 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdx1P52946 Gm5070-201ENSMUST00000177599 862 ntBASIC12.07□□□□□ -0.48
Pdx1P52946 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.07□□□□□ -0.48
Pdx1P52946 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.07□□□□□ -0.48
Pdx1P52946 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdx1P52946 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdx1P52946 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdx1P52946 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pdx1P52946 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pdx1P52946 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.07□□□□□ -0.48
Pdx1P52946 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.07□□□□□ -0.48
Pdx1P52946 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdx1P52946 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.06□□□□□ -0.48
Pdx1P52946 Gm6963-201ENSMUST00000147879 379 ntBASIC12.06□□□□□ -0.48
Pdx1P52946 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.06□□□□□ -0.48
Pdx1P52946 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.06□□□□□ -0.48
Pdx1P52946 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.06□□□□□ -0.48
Pdx1P52946 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.06□□□□□ -0.48
Pdx1P52946 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.06□□□□□ -0.48
Pdx1P52946 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.06□□□□□ -0.48
Pdx1P52946 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdx1P52946 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.06□□□□□ -0.48
Pdx1P52946 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdx1P52946 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdx1P52946 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdx1P52946 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdx1P52946 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdx1P52946 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdx1P52946 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.05□□□□□ -0.48
Pdx1P52946 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.05□□□□□ -0.48
Pdx1P52946 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms