Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Hmga2P52927 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.37□□□□□ -0.75
Hmga2P52927 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.37□□□□□ -0.75
Hmga2P52927 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.37□□□□□ -0.75
Hmga2P52927 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.37□□□□□ -0.75
Hmga2P52927 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.37□□□□□ -0.75
Hmga2P52927 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.37□□□□□ -0.75
Hmga2P52927 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hmga2P52927 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hmga2P52927 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
Hmga2P52927 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hmga2P52927 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hmga2P52927 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmga2P52927 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Hmga2P52927 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.36□□□□□ -0.75
Hmga2P52927 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.36□□□□□ -0.75
Hmga2P52927 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Hmga2P52927 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Hmga2P52927 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Hmga2P52927 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Hmga2P52927 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.36□□□□□ -0.75
Hmga2P52927 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.36□□□□□ -0.75
Hmga2P52927 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.36□□□□□ -0.75
Hmga2P52927 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.36□□□□□ -0.75
Hmga2P52927 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.36□□□□□ -0.75
Hmga2P52927 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.36□□□□□ -0.75
Hmga2P52927 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.36□□□□□ -0.75
Hmga2P52927 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.36□□□□□ -0.75
Hmga2P52927 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hmga2P52927 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 BC043934-202ENSMUST00000185694 2356 ntBASIC10.36□□□□□ -0.75
Hmga2P52927 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmga2P52927 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmga2P52927 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.35□□□□□ -0.75
Hmga2P52927 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmga2P52927 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmga2P52927 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Hmga2P52927 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hmga2P52927 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmga2P52927 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hmga2P52927 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.35□□□□□ -0.75
Hmga2P52927 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmga2P52927 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hmga2P52927 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmga2P52927 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmga2P52927 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms