Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm44882-201ENSMUST00000205702 802 ntBASIC10.12□□□□□ -0.79
Nkx2-1P50220 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-1P50220 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.11□□□□□ -0.79
Nkx2-1P50220 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.11□□□□□ -0.79
Nkx2-1P50220 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-1P50220 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.1□□□□□ -0.79
Nkx2-1P50220 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Gm11618-201ENSMUST00000117946 267 ntBASIC10.1□□□□□ -0.79
Nkx2-1P50220 Gm12091-201ENSMUST00000146791 830 ntBASIC10.1□□□□□ -0.79
Nkx2-1P50220 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Rmrp-201ENSMUST00000157463 271 ntBASIC10.1□□□□□ -0.79
Nkx2-1P50220 Gm28911-201ENSMUST00000188837 117 ntBASIC10.1□□□□□ -0.79
Nkx2-1P50220 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.1□□□□□ -0.79
Nkx2-1P50220 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.1□□□□□ -0.79
Nkx2-1P50220 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms