Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.47□□□□□ -0.25
Brca1P48754 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.47□□□□□ -0.25
Brca1P48754 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.47□□□□□ -0.25
Brca1P48754 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.47□□□□□ -0.25
Brca1P48754 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brca1P48754 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.47□□□□□ -0.25
Brca1P48754 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.46□□□□□ -0.25
Brca1P48754 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Brca1P48754 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.46□□□□□ -0.25
Brca1P48754 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Brca1P48754 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.46□□□□□ -0.25
Brca1P48754 Gm13117-201ENSMUST00000120894 691 ntBASIC13.46□□□□□ -0.25
Brca1P48754 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.46□□□□□ -0.25
Brca1P48754 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC13.46□□□□□ -0.25
Brca1P48754 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.46□□□□□ -0.25
Brca1P48754 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.46□□□□□ -0.25
Brca1P48754 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Brca1P48754 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Brca1P48754 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.46□□□□□ -0.25
Brca1P48754 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.46□□□□□ -0.25
Brca1P48754 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.46□□□□□ -0.25
Brca1P48754 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.46□□□□□ -0.25
Brca1P48754 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Brca1P48754 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brca1P48754 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Brca1P48754 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Brca1P48754 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Brca1P48754 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Brca1P48754 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.46□□□□□ -0.26
Brca1P48754 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Brca1P48754 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Brca1P48754 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC13.46□□□□□ -0.26
Brca1P48754 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.46□□□□□ -0.26
Brca1P48754 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Brca1P48754 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Brca1P48754 Gm5982-201ENSMUST00000196234 512 ntBASIC13.46□□□□□ -0.26
Brca1P48754 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Brca1P48754 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.46□□□□□ -0.26
Brca1P48754 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Brca1P48754 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.46□□□□□ -0.26
Brca1P48754 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Brca1P48754 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Brca1P48754 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Brca1P48754 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.45□□□□□ -0.26
Brca1P48754 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Brca1P48754 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.45□□□□□ -0.26
Brca1P48754 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.45□□□□□ -0.26
Brca1P48754 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.45□□□□□ -0.26
Brca1P48754 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Gm11619-201ENSMUST00000117474 237 ntBASIC13.45□□□□□ -0.26
Brca1P48754 Gm14395-201ENSMUST00000120494 563 ntBASIC13.45□□□□□ -0.26
Brca1P48754 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.45□□□□□ -0.26
Brca1P48754 Gm12906-201ENSMUST00000154610 441 ntBASIC13.45□□□□□ -0.26
Brca1P48754 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms